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Physical Oceanography

Asano K. and Michida Y.: Geostrophic components of the North Pacific subarctic gyre estimated from surface drifters and Argo floats. Proc. Int. Sympo, Okhotsk Sea and Sea Ice, 22, 146-149, 2007.

Chuda T., Kimura R. and Niino H.: Vertical fine structures of temperature and water vapor in the free atmosphere. Journal of the Meteorological Society of Japan, 85, 583-597, 2007.

Iga K. and Kimura R.: Convection driven by collective buoyancy of microbubbles. Fluid Dynamics Research, 39, 68-97, 2007.

Iwasaka N., Ohno Y., 0ka E., Hoshimoto M. and Yoshida T.: Recent studies on mixed layer variations and distributions in the North Pacific using Argo data. Kaiyo Monthly, 39, 445-449, 2007

Kawabe M.: Kuroshio variations and Kuroshio-climate system. Kaiyo Monthly, 39, 683-689, 2007.

Komaki K. and Kawabe M.: Correction method for full-depth current velocity with lowered acoustic Doppler current profiler (LADCP). Journal of Oceanography, 63, 995-1007, 2007.

Komaki K. and Kawabe M.: Structure of the upper deep current in the Melanesian Basin, western North Pacific. La mer, 45, 15-22, 2007.

Mizuno T., Niino H., Kobayashi F., Suzuki O., Kato T., Tsuboki K., Tamura Y., Akaeda K. and Ebihara S.: Report on the Tornado Symposium sponsored by Meteorological Research Institute. Tenki, 54, 889-898, 2007. (in Japanese)

Niino H.: Atmospheric disturbances. In: Plan for Global Precipitation Measurement (GPM): Scientific and Social Expectation, EORC, JAXA, pp.30-34, 2007.

Niino H.: Toward mitigation of tornado disaster. Yobou-Jihou, 230, 8-13, 2007. (in Japanese)

Niino H.: Attracted by vortices for 30 years. Part I. Tenkist, 48, 1-4, 2007. (in Japanese)

Niino H.: Attracted by vortices for 30 years. Part II. Tenkist, 49, 2-4,2007. (in Japanese)

Niino H.: Tornadoes and waterspouts. Tenki, 54, 933-936, 2007. (in Japanese)

Noda A.T. and Niino H.: High-resolution simulation of a cumulonimbus cloud accompanied by a tornado: Toward understanding the mechanism of a tornadogenesis. Journal of the Japan Association for Wind Engineering, 32, 357-368, 2007. (in Japanese)

Ogura Y.: How to understand and enjoy weather phenomena, No.9, An extratropical cyclone in the dissipating stage. Tenki, 54, 247-253, 2007. (in Japanese)

Ogura Y.: How to understand and enjoy weather phenomena, No.10, Weather diagnosis of heavy snowfall over Kanto and Koushin Districts. Tenki, 54, 573-579, 2007. (in Japanese)

Ogura Y., Kumabe R. and Nishimura S.: How to understand and enjoy weather phenomena, No.11, An extratropical cyclone that developed to a typoon strength on 6 January 2007. Tenki, 54, 663-669, 2007. (in Japanese)

Ogura Y., Kumabe R. and Nishimura S.: How to understand and enjoy weather phenomena, No.12, Torrential rain and severe wind associated with an upper-level dipole-type flow on 27 September 2006. Tenki, 54, 917-922, 2007. (in Japanese)

Ogura Y., Kumabe R. and Nishimura S.: How to understand and enjoy weather phenomena, No.13, Torrential rain and violent wind associated with a tropical cyclone and an Autumn Rain Front on 6-8 0ctobef 2006. Tenki, 54, 961-969, 2007. (in Japanese)

Ogura Y., Niino H., Kumabe R. and Nishimura S.: How to understand and enjoy weather phenomena, No.8, Mysterious torrential rain that hit Shizuoka without prediction on 11-12 November 2004. Tenki, 54, 83-90, 2007. (in Japanese)

Oka E., Talley L.D. and Suga T.: Temporal variability of winter mixed layer in the mid-to high-latitude North Pacific. Journal of Oceanography, 63, 293-307, 2007.

Tagami H. and Niino H.: A study of meso-alpha-scale disturbances on the Baiu Front and their environmental field. Journal of the Meteorological Society of Japan, 85, 767-784, 2007.

Tanaka K., Michida Y. and Komatsu T.: A numerical experiment on ocean circulation forced by seasonal winds in Suruga Bay. Coastal Marine Science, 31, 30-39, 2007.

Ueno H., 0ka E., Suga T., 0nishi H. and Roemmich D.: Formation and variation of temperature inversions in the eastern subarctic North Pacific. Geophysical Research Letters, 34(5), L05603, doi:10.1029/2006GL028715, 2007.

Yanagimoto D. and Kawabe M.: Deep-circulation flow at mid-latitude in the western North Pacific. Deep-Sea Research Part I, 54, 2067-2081, 2007.

Yanase W. and Niino H.: Dependence of polar low development on baroclinicity and physical processes: An idealized high-resolution numerical experiment. Journal of the Atmospheric Sciences, 64, 3044-3067, 2007.

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Chemical Oceanography

Amakawa H., Nomura M., Sasaki K., 0ura Y. and Ebihara M.: Vertical distribution of Scandium in the North Central Pacific. Geophysical Research Letters, 34, L11606, doi:10.1029/2007GLO29903, 2007.

Aoyama M., Becker S., Dai M., Daimon H., Gordon L.I., Kasai H., Kerouel R., Kress N., Masten D., Murata A., Nagai N., Ogawa H., Ota H., Saito H., Saito K., Himizu T., Takano H., Tsuda A., Yokouchi K. and Youenou A.: Recent comparability of oceanographic nutrients data: Results of a 2003 intercomparison exercise using reference materials. Analytical Sciences, 23, 1151-1154, 2007.

Fukuda H., 0gawa H., Sohrin R., Yamasaki A. and Koike I.: Sources of dissolved organic carbon and nitrogen in Otsuchi Bay on the Sanriku ria coast of Japan in the spring. Coastal Marine Science, 31, 19-29, 2007.

Fukuda H., Sohrin R., Nagata T. and Koike I.: Size distribution and biomass of nanoflagellates in meso- and bathypelagic layers of the subarctic Pacific. Aquatic Microbial Ecology, 46, 203-207, 2007.

Gamo T. (ed.): Series of Geochemistry Courses, Vol.7: Geochemistry of the Environment, Baifukan, Co. Ltd., Tokyo, 235pp., 2007. (in Japanese)

Gamo T.: Japan Sea and Sulu Sea: Geochemical studies on deep convection systems of the two marginal basins in contrast with each other. Transaction of The Research Institute for Oceanochemistry, 20, 3-17, 2007. (in Japanese)

Gamo T., Kato Y., Hasumoto H., Kakiuchi H., Momoshima N., Takahata N. and Sano Y.: Geochemical implications for the mechanism of deep convection in a semi-closed tropical marginal basin : Sulu Sea. Deep-sea Research II, 54, 4-13, 2007.

Gamo T., 0kamura K., Mitsuzawa K. and Asakawa K.: Tectonic pumping: earthquake-induced chemical flux detected in situ by a submarine cable experiment in Sagami Bay, Japan. Proceeding of the Japan Academy, Series B., 83, 199-204, 2007.

Goto S., Gamo T., Chiba H., Fujioka K. and Mitsuzawa K.: Contribution of heat outputs from high-and low-temperature hydrothermal sources to the neutrally buoyant plume at the TAG hydrothermal mound, Mid-Atlantic Ridge. Earth, Planets and Space, 59, 1141-1146, 2007.

Hongo Y., 0bata H., Gamo T., Nakashima M., Ishibashi J., Konno U., Saegusa S., 0hkubo S. and Tsunogai U.: Rare earth elements in the hydrothermal system at Okinawa Trough back-arc basin. Geochemical Society of Japan, 41, 1-15, 2007.

Johnson K.S., Boyle E., Bruland K., Coale K., Measures C., Moffett J., Aguilar-Islas A., Barbeau K., Bergquist B., Bowie A., Buck K., Cai Y., Chase Z., Cullen J., Doi T., Elrod V., Fitzwater S., Gordon M., King A., Laan P., Laglera-Baquer L., Landing W., Lohan M., Mendez J., Milne A., 0bata H., 0ssiander L., Plant J., Sarthou G., Sedwick P., Smith G., Sohst B., Tanner S., van den Berg S. and Wu J.: Developing standards for dissolved iron in seawater. EOS, 88(11), 131-132, 2007.

Kato S., Ui T., Uematsu M. and Kajii Y.: Trace gas measurements over the northwest Pacific during the 2002 I0C cruise. Geochemistry, Geophysics, Geosystems, 8, Q06M1O, doi:10.1029/2006GC001241, 2007.

Kim C., Nishimura Y. and Nagata T.: High potential activity of alkaline phosphatase in the benthic nepheloid layer of a large mesotrophic lake: Implications for phosphorus regeneration in oxygenated hypolimnion. Aquatic Microbial Ecology, 49, 303-311, 2007.

Kinoshita N., Hashimoto T., Nakanishi T., Yokoyama A., Amakawa H., Mitsugashira T., 0htsuki T., Takahashi N., Ahmad I., Greene J.P., Henderson D.J., Jiang C.L., Notani M., Pardo R.C., Patel N., Rehm K.E., Scott R., Vondrasek R., Jisonna L., Collon P., Robertson D., Schmitt C., Tang X.D., Kashiv Y. and Paul M.: Technological development for half-life measurement of 146Sm nuclide. Journal of Nuclear and Radiochemical Sciences, 8, 109-112, 2007.

Koike I. and Fukuda H.: Mini-review: Assessment of size distribution of suspended particles in coastal and estuarine environments using in situ instruments. Coastal Marine Science, 31, 1-8, 2007.

Matsumoto K., Minami H., Hayano T., Uyama Y., Tanimoto H. and Uematsu M.: Regional climatology of particulate carbonaceous substances in the northern area of the east Asian Pacific rim. Journal of Geophysical Research, 112, D24203, doi:10.1029/2007JD008607, 2007.

Mito Y., Yamada Y., 0gawa H., Yamamoto T. and Tada K.: Spatial and seasonal variations of surface water nitrogen and phosphorus of Chita Bay. Bulletin on Coastal Oceanography, 44, 191-202, 2007. (in Japanese)

Miura K. and Uematsu M.: Shipboard Observation. In: Kasahara M. and Tohno S. (ed.), Aerosol impact to Environment, Kyoto University Press, pp.136-151, 2007. (in Japanese)

Miyajima T.: Eutrophication-related parameters. In: Washida N. (ed.) Environmental Chemistry. Maruzen Co., Ltd., pp.282-287, 2007. (in Japanese)

Miyajima T., Hata H., Umezawa Y., Kayanne H. and Koike I.: Distribution and partitioning of nitrogen and phosphorus in a fringing reef lagoon of Ishigaki Island, Northwestern Pacific. Marine Ecology Progress Series, 341, 45-57, 2007.

Miyajima T., Tanaka Y., Koike I., Yamano H. and Kayanne H.: Evaluation of spatial correlation between nutrient exchange rates and benthic biota in a reef-flat ecosystem by GIS-assisted flow-tracking. Journal of Oceanography, 63, 643-659, 2007.

Motegi C. and Nagata T.: Enhancement of viral production by addition of nitrogen or nitrogen plus carbon in subtropical surface waters of the South Pacific. Aquatic Microbial Ecology, 48, 27-34, 2007.

Nakayama N., 0bata H. and Gamo T.: Consumption of dissolved oxygen in the deep Japan Sea. giving a precise isotopic fractionation factor. Geophysical Research Letters, 34, L20604, doi:10.1029/2007GL029917, 2007.

Narita Y. and Uematsu M.: Transport of Pollution Aerosols over ocean from Land. Bulletin of the Society of Sea Water Science, Japan, 61(2), 95-101, 2007. (in Japanese)

Nishida S. and Gamo T.: Biogeochemistry and biodiversity in the Sulu Sea. Deep Sea Research II, 54, 1-3, 2007.

Nishio Y., Nakai S., Ishi T. and Sano Y.: Isotope systematics of Li, Sr, Nd, and volatiles in Indian Ocean MORBs of the Rodrigues Triple Junction: constraints on the DUPAL origin. Geochimica et Cosmochimica Acta, 71, 745-759, 2007.

Nishimura Y. and Nagata T.: Alpha-proteobacterial dominance in a large mesotrophic lake (Lake Biwa, Japan). Aquatic Microbial Ecology, 48, 231-240, 2007.

Nishizawa M., Sano Y., Ueno Y. and Maruyama S.: Speciation and isotope ratios of nitrogen in fluid inclusions from seafloor hydrothermal deposits at ~3.5 Ga. Earth and Planetary Science Letters, 254, 332-344, 2007.

Obata H.: Investigation of water quality-Seawater. In: Washida N. (ed.) Environmental Chemistry. Maruzen Co., Ltd., 2007. (in Japanese)

Obata H., Alibo D.S. and Nozaki Y.: Dissolved aluminum, indium and cerium in the Sea of Japan and the Sea of Okhotsk: Comparison to the marginal seas of the western North Pacific. Journal of Geophysical Research Ocean, 112, C12003, doi:10.1029/2006JC003944, 2007.

Obata H., Doi T., Hongo Y., Alibo D.S., Minami H., Kato Y. and Maruo M.: Manganese, cerium, and iron in the Philippine, Celebes, and Sulu Seas. Deep-Sea Research II, 54, 38-49, 2007.

Ogawa H.: Measurements of organic matter in aquatic environments, In: The fifth series of experimental chemistry, edited by the chemical society of Japan, pp.309-319, Maruzen, Tokyo, 2007. (in Japanese)

Okubo A., 0bata H., Gamo T., Minami H. and Yamada M.: Scavenging of 230Th in the Sulu Sea. Deep-Sea Research, 54, 50-59, 2007.

Okubo A., 0bata H., Luo S., Gamo T., Minami H. and Yamada M.: Particle flux in the twilight zone of the eastern Indian Ocean: a constraint from 234U-230Th and 228Ra-228Th disequilibrium. Deep-Sea Research I, 54, 1758-1772, 2007.

Patra P.K., Moore J.K., Mahowald N., Uematsu M., Doney S.C. and Nakazawa T.: Exploring the sensitivity of interannual basin-scale air-sea CO2 fluxes to variability in atmospheric dust deposition using ocean carbon cycle models and atmospheric CO2 inversions. Journal of Geophysical Research, 112, G02012, doi:10.1029/2006JGOOO236, 2007.

Ram A.S.P., Nagata T., Tomaru Y. and Nagasaki K.: Tungstate compounds as an alternative to uranyl acetate for enumerating viral infected prokaryote cells in aquatic systems. Aquatic Microbial Ecology, 47, 209-212, 2007.

Sugimoto K., Fukuda H., Baki M.A. and Koike I.: Bacterial contributions to formation of transparent exopolymer particles (TEP) and seasonal trends in coastal waters of Sagami bay, Japan. Aquatic Microbial Ecology, 46, 31-41, 2007.

Tanaka Y., Miyajima T., Koike I., Hayashibara T. and Ogawa H.: Imbalanced coral growth between organic tissue and carbonate skeleton brought by nutrient enrichment. Limnology and Oceanography, 52, 1139-1146, 2007.

Tazoe H., Obata H. and Gamo T.: Determination of cerium isotope ratios in geochemical samples using oxidative extraction technique with chelating resin. Journal Analytical Atomic Spectrometry, 22, 616-622, 2007.

Tazoe H., Obata H., Amakawa H., Nozaki Y. and Gamo T.: Precise determination of the cerium isotopic composition of surface water in the Northwest Pacific ocean and Tokyo Bay. Marine Chemistry, 103, 1-14, 2007.

Terada K., Sasaki Y., Anand M., Joy K.H. and Sano Y.: Uranium-lead systematics of phosphates in lunar basaltic regolith breccia, Meteorite Hills O1210. Earth and Planetary Science Letters, 259, 77-84, 2007.

Toki T., Tsunogai U., Gamo T. and Tanahashi M.: Geochemical study of pore fluid in surface sediment at the Daini-Atsumi Knoll. Journal of Geochemical Exploration, 95, 29-39, 2007.

Uematsu M. and Narita Y.: Substances of marine origin. In: The Chemical Society of Japan (ed.), Survey techniques for atmospheric substances, Environmental Chemistry, Maruzen, Co., Ltd., pp.71-74, 2007. (in Japanese)

Uematsu M. and Narita Y.: Inorganic aerosols. In: The Chemical Society of Japan (ed.), Survey techniques for atmospheric sub-stances, Lecture Series of Experimental Chemistry, Environmental Chemistry. Maruzen, Co., Ltd., pp.226-230, 2007. (in Japanese)

Umezawa Y., Miyajima T., Tanaka Y. and Koike I.: Variation in internal δ15N and δ13C distributions and their bulk values in the brown macroalga Padina australis growing in subtropical oligotrophic Journal of Phycology, 43, 437-448, 2007.

Uno I., Uematsu M., Hara Y., He Y.J., 0hara T., Mori A., Kamaya T., Murano K., Sada-naga Y. and Bandow H.: Numerical study of the atmospheric input of anthropogenic total nitrate to the marginal seas in the western North Pacific region. Geophysical Research Letters, 34, L17817, doi:10.1029/2007GL030338, 2007.

Yoshida K., Narita S., Frank G., Iwamoto Y., Kondo M. and Uematsu M.: Chemical composition and size distribution of sea fog over the northern North Pacific. Chikyukagaku, 41, 156-172, 2007. (in Japanese)

Yoshimura T. and Ogawa H.: Dissolved organic matter dynamics during SEEDS and SERIES experiments. PICES Scientific Reports, No.31, 2007.

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Ocean Floor Geoscience

Asada M., Deschamps A., Fujiwara T. and Nakamura Y.: Submarine lava flow emplacement and faulting in the axial valley of two morphologically distinct spreading segments of the Mariana back-arc basin from Wadatsumi side-scan sonar images. Geochemistry, Geophysics, Geosystems, 8, Q04001, 2007.

Chen Z.Q., Tong J., Kaiho K. and Kawahata H.: Onset of biotic and environmental recovery from the end-Permian mass extinction within 1-2 million years: A case study of the Lower Triassic of the Meishan section, South China. Palaeogeography, Palaeoclimatology, Palaeoecology, 252, 176-187, 2007.

Coffin M.F.: Hotspot modification of crust in the ocean. In: The Establishment of the Outer Limits of the Continental Shelf beyond 200 Nautical Miles-Its International Cir-cumstances, and its Scientific and Technical Aspects, Ocean Policy Research Foundation (Ship & Ocean Foundation), Tokyo, pp.201-212, 2007.

Connelly D.P., German C. R., Asada M., 0kino K., Egorov A., Naganuma T., Pimenov N., Cherkashev G. and Tamaki K.: Hydrothermal activity on the ultra-slow spreading southern Knipovich Ridge. Geochemistry, Geophysics, Geosystems, 8, Q08013, doi:10.1029/2007GCOO1652, 2007.

Fujiwara H., Sato S., Shirai M. and Tajima Y.: A Field Study on the Sediment Movement in the Tenryu-Enshunada Watershed. Annual Journal of Coastal Engineering, 54, 591-595, 2007. (in Japanese)

Gupta L.P. and Kawahata H.: ENSO related variations in biogeochemistry of AA and HA in setting particles along the equatorial Pacific Ocean. Journal of Oceanography, 63, 695-709, 2007.

Gupta L.P., Suzuki A. and Kawahata H.: Endolithic aspartic acid as a proxy of fluctuations in coral growth. JGR Biogeosciences, 112, G01001, 2007.

Ingle S.P., Mahoney J.J., Sato H., Coffin M.F., Kimura J.-I. and Nakanishi M.: Depleted mantle wedge and sediment signature in unusual basalts from the Manihiki Plateau, Central Pacific. Geology, 35, 595-598, 2007.

Inoue M., Suzuki A., Nohara M., Hibino K. and Kawahata H.: Empirical assessment of coral Sr/Ca and Mg/Ca ratios as climate proxies using colonies grown at different temperatures. Geophysical Research Letters, 34, L12611, doi:10.1029/2007GL029628,2007.

Isozaki Y., Kawahata H. and Ota A.: A unique carbon isotope record across the Guadalupian-Lopingian (Middle-Upper Permian) boundary in mid-oceanic paleo-atoll carbonates: The high-productivity "Kamura event" and its collapse in Panthalassa. Global Planetary Change, 55, 21-38, 2007.

Kawahata H., Nakashima R., Suzuki A. and Furuta N.: Isotopic characteristics and calcification process of pearl and pearl oyster. Chishitsu News, 632, 13-17, 2007. (in Japanese)

Kuroda J., 0gawa N., Tanimizu M., Coffin M., Tokuyama H., Kitazato H. and Ohkouchi N.: Contemporaneous massive subaerial volcanism and Late Cretaceous oceanic anoxic event 2. Earth and Planetary Science Letters, 256, 211-223, 2007.

Martinez F., Okino K., Ohara Y., Reysenbach A.-L. and Goffredi S.K.: Back-Arc Basins. Oceanography, 20, 1, 116-127, 2007.

Minoshima K., Kawahata H. and Ikehara K.: Changes in biological production in the mixed water region (MWR) of the northwestern North Pacific during the last 27 kyr. Palaeogeography, Palaeoclimatology, Palaeoecology, 254, 430-447, 2007.

Minoshima K., Kawahata H., Irino T., Ikehara K., Aoki K., Uchida M., Yoneda M. and Shibata Y.: Deep water ventilation in the northwestern North Pacific during the last deglaciation and the early Holocene (15-5 cal. kyr B.P.) based on AMS 14C dating. Nuclear Instrument Method B, 259, 448-452, 2007.

Moriya K., Wilson P.A., Friedrich O., Erbacher J. and Kawahata H.: Testing for icesheets during the mid-Cretaceous greenhouse using glassy foraminiferal calcite from the mid-Cenomanian tropics on Demerara Rise. Geology, 35, 615-618, 2007.

Nakashima R., Suzuki A., Watanabe T., Minoshima K., Hokanishi N. and Kawahata H.: Life history of the extinct scallop Fortipecten takahashii, reconstructed from oxygen isotope analysis. Chishitsu News,632, 7-12, 2007. (in Japanese)

Ohara Y., Kasahara J. and Okino K.: Seismic study on oceanic core complexes in the Parece Vela backarc basin. Island Arc, 16, 3, 348-360, 2007.

Sawyer D.S., Coffin M.F., Reston T.J., Stock J.M. and Hopper J.R.: COBBOOM : the continental breakup and birth of oceans mission. Scientific Drilling, 5, 13-25, doi:10.2204/, 2007.

Shirai M., Liu H., Tajima Y. and Sato S.: Sand grains transport around river mouth revealed by OSL measurement technique. Quaternary International, 167-168(supplement), 381, 2007.

Shirai M., Nishimura M. and Yasuda H.: Descriptive evaluation of consolidated sedimentary rock structures with X-ray imaging : Examples from Site 1276 core samples. In: Tucholke B.E. et al. (eds.), Proceedings of ODP. Scientific Results, 210, College Station, TX (Ocean Drilling Program), USA, Chapter111, pp.1-11, 2007.

Shirai M. and Omura A.: Sand grains transport from river to deep marine revealed by OSL measurement technique. Quaternary International, 167-168(supplement), 381, 2007.

Suzuki A., Inoue M. and Kawahata H.: Oxygen and carbon isotope ratios of hermatypic corals. Chishitsu News, 632, 23-38, 2007. (in Japanese)

Suzuki A. and Kawahata H.: Oxygen and carbon isotope ratios and their kinetic effectsin biogenic and non-biogenic carbonates. Chikyu-Kagaku, 41, 17-33, 2007. (in Japanese)

Suzuki A. and Kawahata H.: Biomineralization and global environment. Chishitsu News, 632, 6, 2007. (in Japanese)

Takeuchi M., Kawahata H., Gupta L.P., Kita N., Morishita Y., 0no Y. and Komai T.: Arsenic Resistance and Removal by marine and non-marine bacteria. Journal of Biotechnology, 127, 434-442, 2007.

Tsuji T., Nakamura Y., Tokuyama H., Coffin M.F. and Koda K.: Oceanic crust and Moho of the Pacific plate in the eastern Ogasawara. Island Arc, 16, 361-373, 2007.

Yamamura M., Kawahata H., Matsumoto K., Takashima R. and Nishi H.: Paleoceanography of the northwestern Pacific during the Albian. Palaeogeography, Palaeoclimatology, Paraeoecology, 254, 477-491, 2007.

Yoneda M., Uno H., Shibata Y., Suzuki R., Kumamoto Y., Yoshida K., Sasaki T., Suzuki A. and Kawahata H.: Radiocarbon marine reservoir ages in the western Pacific estimated by pre-bomb molluscan shells. Nuclear Instrument Method B, 259, 432-437, 2007.

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Marine Ecosystem Dynamics

Boyd P.W., Jickells T., Law C.S., Blain S., Boyle E.A., Buesseler K.O., Coale K.H., Cullen J.J., de Baar H.J.W., Follows M., Harvey M., Lancelot C., Levasseur M., Owens N.P.J., Pollard R., Rivkin R.B., Sarmiento J., Schoemann V., Smetacek V., Takeda S., Tsuda A., Turner S. and Watson A.J.: Mesoscale iron enrichment experiments 1993-2005: Synthesis and future direction. Science, 315, 612-617, 2007.

Hamasaki K.: Distribution of phototrophic bacteria in the oceans and its perspectives on microbial oceanography. Biseibutsu Seitai, 22, 5-14, 2007. (in Japanese)

Hamasaki K., Taniguchi A., Tada Y., Long R.A. and Azam F.: Actively growing bacteria in the Inland Sea of Japan, identified by combined bromodeoxyuridine immunocapture and denaturing gradient gel electrophoresis. Applied and Environmental Microbiology, 73, 2787-2798, 2007.

Inoue K., Nishimura M., Nayak B. and Kogure K.: Separation of marine bacteria according to buoyant density by use of the density-dependent cell sorting method. Applied and Environmental Microbiology, 73, 1049-1053, 2007.

Inoue N., Watanabe H., Kojima S. and Sekiguchi H.: Population structure of the Japanese spiny lobster Panulirus japonicus inferred by nucleotide sequence analysis of the mitochondrial COI gene. Fisheries Science, 73, 550-556, 2007.

Itoh H. and Nishida S.: Life history of the copepod Hemicyclops gomsoensis (Poecilostomatoida, Clausidiidae) associated with decapod burrows in the Tama-River estuary, central Japan. Plankton and Benthos Research, 2, 134-146, 2007.

Kamiya E., Izumiyama S., Nishimura M., Mitchell J. and Kogure K.: Effects of fixation and storage on flow cytometric analysis of marine bacteria. Journal of Oceanography, 63, 101-112, 2007.

Khan N.H., Ishii Y., Kimata-Kino N., Esaki H., Nishino T., Nishimura M. and Kogure K.: Isolation of Pseudomonas aeruginosa from open ocean and comparison with freshwater, clinical and animal isolates. Microbial Ecology, 53, 173-186, 2007.

Kishi M.J., Eslinger D.L., Kashiwai M., Megrey B.A., Ware D.M., Werner F.E., Aita-Noguchi M., Azumaya T., Fujii M., Hashimoto S., Huang D., Iizumi H., Ishida Y., Kang S., Kantakov G.A., Kim H.-c., Komatsu K., Navrotsky V.V., Smith S.L., Tadokoro K., Tsuda A., Yamamura O., Yamanaka Y., Yokouchi K., Yoshie N., Zhang J., Zuenko Y.I. and Zvansky V.I.: NEMURO-A lower trophic level model for the North Pacific marine ecosystem. Ecological Modeling, 202, 12-25, 2007.

Kogure K.: How do we evaluate the viable but nonculturable state? Journal Veterinary Medicine, 60, 583-584, 2007. (in Japanese)

Kojima S., Adachi K. and Kodama Y.: Formation of deep-sea fauna and changes of marine environment in the Japan Sea. Fossiles, 82, 67-71, 2007. (in Japanese)

Nakaoka M., Tanaka Y., Mukai H., Suzuki T. and Aryuthaka T.: Tsunami impacts on biodiversity of seagrass communities in the Andaman Sea, Thailand: (1) Seagrass abundance and diversity. Publications of the Seto Marine Biological Laboratory, 8, 49-56, 2007.

Nishida S. and Gamo T. (eds.): Biogeochemistry and Biodiversity in the Sulu Sea. Deep-Sea Research II, 54(1-2), Elsevier Ltd., 176 pp., 2007.

Nishikawa J., Matsuura H., Castillo L.V., Campos W.L. and Nishida S.: Biomass, vertical distribution and community structure of mesozooplankton in the Sulu Sea and its adjacent waters. Deep-Sea Research II, 154, 114-130, 2007.

Nishioka J., 0no T., Saito H., Nakatsuka T., Takeda S., Yoshimura T., Suzuki K., Kuma K., Nakabayashi S. and Tsuda A.: Iron supply to the western subarctic Pacific: Importance of iron export from the Sea of Okhotsk. Journal of Geophysical Research, 112, 10012, doi:10.1029/2006JC004055, 2007.

0hwada K. and Nishimura M.: Microbial monitoring during oil spill accidents in marine environment-mesocosm experiments. Nippon Suisan Gakkaishi, 73, 313-316, 2007. (in Japanese)

Seo Y., Ikemoto E., Yoshida A. and Kogure K.: Particle capture by marine bacteria. Aquatic Microbial Ecology, 49, 243-253, 2007.

Tanaka Y. and Kayanne H.: Relationship of species composition of tropical seagrass meadows to multiple physical environmental factors. Ecological Research, 22, 87-96, 2007, doi:10.1007/s11284-OO6-0189-3, 2007.

Tanaka Y. and Nakaoka M.: Interspecific variation in photosynthesis and respiration balance of three seagrasses in relation to light availability, Marine Ecology Progress Series, 350, 63-70, 2007.

Toyoshima S., Takahashi S., Ikemoto T., Agusa T., Miyasaka H., 0mori K., Nishida S. and Tanabe S.: Evaluation of accumulation properties of trace elements in a deep-sea ecosystem of Sagami Bay, Japan by using stable isotope ratios (δ15N and δ13C). In: Chemical Pollution and Environmental Changes (Proceedings of the International Symposium: Pioneering Studies of Young Scientists on Chemical Pollution and Environmental Changes, November 17-19, 2006), Universal Academy Press, pp.225-228, 2007.

Tsuda A.: Iron-fertilization experiments in the Oceans. In: Graduate School of Environmental Earth Science, Hokkaido Univ. (ed.), Global Warming, Hokkaido Univ. Press, Sapporo, p157-169, 2007. (in Japanese)

Tsuda A., Takeda S., Saito H., Nishioka J., Kudo I., Nojiri Y., Suzuki K., Uematsu M., Wells M.L., Tsumune D., Yoshimura T., Aono T., Aramaki T., Cochlan W.P., Hayakawa M., Imai K., Isada T., Iwamoto Y., Johnson W.K., Kameyama S., Kato S., Kiyosawa H., Kondo Y., Levasseur M., Machida R., Nagao I., Nakagawa F., Nakanishi T., Nakatsuka S., Narita A., Noiri Y., Obata H., 0gawa H., 0guma K., 0no T., Sakuragi T., Sasakawa M., Sato M., Shimamoto A., Takada H., Trick C.G., Watanabe Y.W., Wong C.S. and Yoshie N.: Evidence for the grazing hypothesis: Grazing reduces phytoplankton responses of the HNLC ecosystem to iron enrichment in the western subarctic Pacific (SEEDSII). Journal of Oceanography, 63, 983-994, 2007.

Wada M.: Mutualistic relationship between a marine bioluminescent bacterium, Photobacterium leiognathi and host fish. Kagaku to Seibutsu, 45, 261-264, 2007. (in Japanese)

Yamada K., Hori M., Tanaka Y., Hasegawa N. and Nakaoka M.: Temporal and spatial macrofaunal community changes along a salinity gradient in seagrass meadows of Akkeshi-ko estuary and Akkeshi Bay, northern Japan. Hydrobioligia, 592, 345-358, 2007.

Yokouchi K., Tsuda A., Kuwata A., Kasai H., Ichikawa T., Hirota Y., Adachi K., Asanuma I. and Ishida H.: Seasonal variations in primary production measured by 13C-spiked incubations around Japan. In: Global climate change and response of carbon cycle in the equatorial Pacific and Indian Oceans and adjacent landmasses, Elsevier Oceanography Series, 73, Eds. by Kawahata H. and Awaya Y., Elsevier, pp.65-88, 2007.

Yoshida A., Nishimura M. and Kogure K.: Bacterial community structure in the Sulu Sea and adjacent areas. Deep Sea Research II, 54, 103-113, 2007.

Yoshimura T., Nishioka J., Saito H., Takeda S., Tsuda A. and Wells M.L.: Distributions of particulate and dissolved organic and inorganic phosphorus in North Pacific surface waters. Marine Chemistry, 103, 112-121, 2007.

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Marine Bioscience

Aoyama J., Wouthuyzen S., Miller M.J., Minegishi Y., Kuroki M., Suharti S.R., Kawakami T., Sumadhiharga K.0. and Tsukamoto K.: Distribution of leptocephali of the freshwater eels, genus Anguilla, in the waters off west Sumatra in the Indian Ocean. Environmental Biology of Fishes, 80, 445-452, 2007.

Arai T.: Studies on life history and migration in fish by otolith analyses. Nippon Suisan Gakkaishi, 73, 652-655, 2007. (in Japanese)

Arai T., Hirata T. and Takagi Y.: Application of laser ablation ICPMS to trace the environmental history of chum salmon Oncorhynchus keta. Marine Environmental Research, 63, 55-66, 2007.

Arai T., 0hji M. and Hirata T.: Trace metal deposition in teleost fish otolith as an environmental indicator. Water, Air, & Soil Pollution, 179, 255-263, 2007.

Deheyn D.D., Kubokawa K., Mccarthy J.K., Murakami A., Porrachia M., Rouse G.W. and Holland N.: Amphioxus green florescent protein. Biological Bulletin, 213, 95-100, 2007.

Dou S. and Tsukamoto K.: Locomotor activity rhythm in the Japanese eel Anguilla japonica elvers. Acta Oceanologica Sinica, 26, 76-89, 2007.

Dou S., Yamada Y., 0kamura A., Tanaka S., Shinoda A. and Tsukamoto K.: Observations on the spawning behavior of artificially matured Japanese eels Anguilla japonica in captivity. Aquaculture, 266, 117-129, 2007.

Fox B.K., Naka T., Inoue K., Takei Y., Hirano T. and Grau E.G.: In vitro effects of homologous natriuretic peptides on growth hormone and prolactin release in the tilapia, Oreochromis mossambicus. General and Comparative Endocrinology, 150, 270-277, 2007.

Frankham R., Ballou J.D. and Briscoe D.A., translated by Nishida M., Takahashi H., Yamazaki Y. and Watanabe K.: Introduction to conservation genetics, Bunichi Sogo Shuppan, Tokyo, 751, 2007.

Gagnaire P.A., Tsukamoto K., Aoyama J., Minegishi Y., Valade P. and Berrebi P.: RFLP and semi-multiplex PCR-based identification of four eel species from the south-western Indian Ocean region. Journal of Fish Biology, 71(B), 279-287, 2007.

Hashiguchi Y., Furuta Y., Kawahara R. and Nishida M.: Diversification and adaptive evolution of putative sweet taste receptors in threespine stickleback. Gene, 396, 170-179, 2007.

Hashiguchi Y. and Nishida M.: Evolution of trace amine-associated receptor (TAAR) gene family in vertebrates: lineage-specific expansions and degradations of a second class of vertebrate chemosensory receptors expressed in the olfactory epithelium. Molecular Biology and Evolution, 24, 2099-2107, 2007.

Hashiguchi Y. and Nishida M.: Molecular mechanisms of adaptation and evolution of odor perception in fishes with special reference to the evolutional dynamics of chemosensory receptor gene families. Japanese Journal of Ichthyology, 54, 105-120, 2007. (in Japanese)

Hashimoto H., Fujihara H., Kawasaki M., Saito T., Shibata M., Takei Y. and Ueta Y.: Centrally and peripherally administered ghrelin potently inhibits water intake in rats. Endocrinology, 148, 1638-1647, 2007.

Hashimoto H., Hyodo S., Kawasaki M., Shibata M., Saito T., Suzuki H., 0tsubo H., Yokoyama T., Fujihara H., Higuchi T., Takei Y. and Ueta Y.: Adrenomedullin 2 (AM2)/intermedin is a more potent activator of hypothalamic oxytocin-secreting neurons than AM possibly through an unidentified receptor in rats. Peptides, 28, 1104-1112, 2007.

Hatase H., 0muta K. and Tsukamoto K.: Bottom or midwater: alternative foraging behaviours in adult female loggerhead sea turtles. Journal of Zoology, 273, 46-55, 2007.

Hayakawa H., Andoh T. and Watanabe T.: Identification of a novel yolk protein in the hermatypic coral Galaxea fascicularis. Zoological Science, 24, 249-255, 2007.

Hyodo S.: Corticotropin-releasing hormone and related peptides. In: Hormone Handbook (New eBook), edited by Urano A., Hyodo S. et al., Nankodo, Tokyo, pp.78-147, 2007. (in Japanese)

Hyodo S.: Melanotropin-releasing factor. In: Hormone Handbook (New eBook), edited by Urano A., Hyodo S. et al., Nankodo, Tokyo, pp.214-215. 2007. (in Japanese)

Hyodo S.: Melanotropin release-inhibiting factor. In: Hormone Handbook (New eBook), edited by Urano A., Hyodo S. et al., Nankodo, Tokyo, pp.216-218, 2007. (in Japanese)

Hyodo S.: Neurohypophysial hormones. In: Hormone Handbook (New eBook), edited by Urano A., Hyodo S. et al., Nankodo, Tokyo, pp.219-302, 2007. (in Japanese)

Hyodo S., Bell J.D., Healy J.M., Kaneko T., Hasegawa S., Takei Y., Donald J.A. and Toop T.: Osmoregulation in elephant fish, Callorhinchus milii (Holocephali), with special reference to the rectal gland. Journal of Experimental Biology, 210, 1303-1310, 2007.

Iwata H., Takeshima H., Tago Y., Watanabe K., Iguchi K. and Nishida M.: Post-stocking dynamics of landlocked ayu traced by a mitochondrial SNP marker. Nippon Suisan Gakkaishi, 73, 278-283, 2007. (in Japanese)

Jennings B.L., Bell J.D., Hyodo S., Toop T. and Donald J.A.: Mechanisms of vasodilation in the dorsal aorta of the elephant fish, Callorhinchus milii (Chimaeriformes: Holocephali). Journal of Comparative Physiology B, 177, 557-567, 2007.

Kawahara R. and Nishida M.: Extensive lineage-specific gene duplication and evolution of the spiggin multi-gene family in stickleback. BMC Evolutionary Biology, 7, 209, 2007.

Kawai H., Kamiya M., Komatsu T., Nakaoka M., Yamamoto T. and The Marine Life Research Group of Takeno: Ten years' monitoring of intertidal macroalgal vegetation of Hyogo Prefecture, northwestern coast of Honshu, Japan to assess the impact of the Nakhodka oil spill. Algae, 22, 1-10, 2007.

Kii S., Tanaka J. and Watanabe T.: Guanine-cytosine contents of the host and symbiont cDNAs in a symbiotic coral. Fisheries Science, 73, 1362-1372, 2007.

Komatsu T., Matsuoka Y., Shibata K., Ikemori T. and Ohkei N.: Mapping and quantifying a Sargassum forest off Ossaka (Toyama Bay, the Sea of Japan) by using narrow multibeam sonar and GIS. In: GIS/spatial analyses in fisheries and aquatic sciences Volume 3, ed. by Nishida T., Kaiola P.J. and Caton A.E., Fishery-Aquatic GIS Research Group, Saitama, pp.97-114, 2007.

Komatstu T., Tatsukawa K., Filippi J.B., Sagawa T., Matsunaga D., MikamiA., Ishida K., Ajisaka T., Tanaka K., Aoki M., Wang W.D., Liu H.F., Zhang S.Y., Zhou M.D. and Sugimoto T.: Distribution of drifting seaweeds in eastern East China Sea. Journal of Marine Systems, 67, 245-252, 2007.

Kon T., Nohara M., Yamanoue Y., Fujiwara Y., Nishida M. and Nishikawa T.: Phylogenetic position of a whale-fall lancelet (Cephalochordata) inferred from whole mitochondrial genome sequences. BMC Evolutionary Biology, 7, 127, 2007.

Kon T., Yoshino T., Mukai T. and Nishida M.: DNA sequences identify numerous cryptic species of the vertebrate: A lesson from the gobioid fish Schindleria. Molecular phylogenetics and Evolution, 44, 53-62, 2007.

Konno N., Hyodo S., Matsuda K. and Uchiyama M.: Arginine vasotocin promotes urea permeability through urea transporter expressed in the toad urinary bladder cells. General and Comparative Endocrinology, 152, 281-285, 2007.

Konno N., Hyodo S., Yamada T., Matsuda K. and Uchiyama M.: Immunolocalization and mRNA expression of the epithelial Na+ channel a-subunit in the kidney and urinary bladder of the marine toad, Bufo marinus, under hyperosmotic conditions. Cell and Tissue Research, 328, 583-594, 2007.

Kotake A., Arai T., 0kamura A., Yamada T., Utoh T., 0ka H.P., Miller M.J. and Tsukamoto K.: Ecological aspects of the Japanese eel, Anguilla japonica, collected from coastal areas of Japan. Zoological Science, 24, 1213-1221, 2007.

Kubokawa K.: Evolution of endocrine system from a view of Amphioxus. In: Zoological Science in 21th century, edited by Nagahama Y. and Suguchi T., 10, pp.210-249, Baifukan, Tokyo, 2007. (in Japanese)

Kubokawa K., Fujiwara Y. and Miyazaki M.: Conformation of whale fauna and its specificities. Kagaku to Seibutsu, 45, 439-443, 2007. (in Japanese)

Kubokawa K. and Satoh N.: Comparative genomics in chordates. In: Life System analyses by Comparative Genomics, Shujun Sha, Tokyo, pp.64-73, 2007. (in Japanese)

Kuriiwa K., Hanzawa N., Yoshino T., Kimura S. and Nishida M.: Phylogenetic relationships and natural hybridization in rabbitfishes (Teleoslei: Siganidae) inferred from mitochondrial and nuclear DNA analyses. Molecular phylogenetics and Evolution, 45, 69-80, 2007.

Kuroki M., Aoyama J., Wouthuyzen S., Sumardiharga K.0., Miller M.J. and Tsukamoto K.: Age and growth of Anguilla bicolor bicolor leptocephali in the eastern Indian ocean. Journal of Fish Biology, 70, 538-550, 2007.

Lavoué S., Miya M., Saitoh K., Ishiguro N.B. and Nishida M.: Phylogenetic relationships among anchovies, sardines, herrings and their relatives (Clupeiformes), inferred from whole mitogenome sequences. Molecular Phylogenetics and Evolution, 43, 1096-1105, 2007.

Ma T., Miller M.J., Aoyama J. and Tsukamoto K.: Genetic identification of Conger myriaster leptocephali in East China Sea. Fisheries Science, 73, 989-994, 2007.

Mabuchi K., Miya M., Azuma Y. and Nishida M.: Independent evolution of the specialized pharyngeal jaw apparatus in cichlid and labrid fishes. BMC Evolutionary Biology, 7, 10, doi:10.1186/1471-2148-7-10, 2007.

Mikami A., Komatsu T., Aoki M. and Sagawa T.: Biomass estimation of a mixed-species Sargassum forest using aerial photography, field survey and Geographical Information Systems. In: GIS/spatial analyses in fisheries and aquatic sciences Volume 3, ed. by Nishida T., Kaiola P.J. and Caton A.E., Fishery-Aquatic GIS Research Group, Saitama, pp.147-160, 2007.

Minagawa G., Miller M.J., Kimura Y., Watanabe S., Shinoda A., Aoyama J. and Tsukamoto K.: Seasonal differences in catches of leptocephali in the East China Sea and Suruga Bay, Japan. Estuarine, Coastal and Shelf Science,71, 730-740, 2007.

Miya M., Holcroft N.I., Satoh T.P., Yamaguchi M., Nishida M. and Wiley E.O.: Mitochondrial genome and a nuclear gene indicate a novel phylogenetic position of deep-sea tube-eye fish (Stylephoridae). Ichthyological Research, 54, 323-332, 2007.

Miyazaki N., Sato K., Watanabe Y., Aoki K., Narasaki T., Kudo K. and Naito Y.: New approrch to diving behaviour of aquatic animals using bio-logging system. The 2007 International Symposium on Underwater Technology and Workshop on Scientific Submarine Cable and Related Technologies, 455-457, 2007.

Mizuta T. and Kubokawa K.: Cloning of cytochrome P450 genes for sex steroid metabolism in amphioxus. Endocrinology, 148, 3554-3565, 2007.

Nag K., Kato A., Sultana N., Ogoshi M., Takei Y. and Hirose S.: Fish calcitonin receptors have novel features. General and Comparative Endocrinology, 154, 48-58, 2007.

Naka T., Katsumata E., Sasaki K., Minamino N., Yoshioka M. and Takei Y.: Natriuretic peptides in cetaceans: Identification, molecular characterization and changes in plasma concentration after landing. Zoological Science, 24, 577-587, 2007.

Niizuma Y., Gabrielsen G.W., Sato K., Watanuki Y. and Naito Y.: Brünnich's guillemots (Uria lomvia) maintain high temperature in the body core during dives. Comparative Biochemistry and Physiology A, 147, 438-444, 2007.

Okamura A., Yamada Y., Horie N., Utoh T., Mikawa N., Tanaka S. and Tsukamolo K.: Effects of water temperature on early development of Japanese eel Anguilla japonica. Fisheries Science, 73, 1241-1248, 2007.

Okamura A., Yamada Y., Yokouchi K., Horie N., Mikawa N., Utoh T., Tanaka S. and Tsukamoto K.: A silvering index for the Japanese eel Anguilla japonica. Environmental Biology of Fishes, 80, 77-89, 2007.

Otake T.: Fish migration revealed by otolith elements. In: Mineral in the Sea, edited by Okoshi K., Seizandou-shyoten, Tokyo, pp.164-179, 2007. (in Japanese)

Sagawa T., Mikami A., Komatsu T., Kosaka N., Kosako A., Miyazaki S. and Takahashi M.: Mapping seagrass beds in Funakoshi Bay (Sanriku Coast, Japan), by high precision multi-spectral image of IKONOS and side scan sonar technique. In: GIS/spatial analyses in fisheries and aquatic sciences Volume 3, ed. by Nishida T., Kaiola P.J. and Caton A.E., Fishery-Aquatic GIS Research Group, Saitama, pp.85-96, 2007.

Saito T., Kaga T., Seki J. and Otake T.: Otolith microstructure of chum salmon Onchorhynchus keta: formation of sea entry check and daily deposition of otolith increments in seawater condition. Fisheries Science, 73, 27-37, 2007.

Sasai S., Katoh F., Kaneko T. and Tsukamoto K.: Ontogenic change of gill chloride cells in leptocephalus and glass eel stages of the Japanese eel, Anguilla japonica. Marine Biology, 150, 487-496, 2007.

Sato K.: Penguins and whales swim at same speed. Kobunsha shinsho, 299pp., 2007. (in Japanese)

Sato K., Watanuki Y., Takahashi A., Miller P.J.0., Tanaka H., Kawabe R., Ponganis P.J., Handrich Y., Akamatsu T., Watanabe Y., Mitani Y., Costa D.P., Bost C.-A., Aoki K., Amano M., Trathan P., Shapiro A. and Naito Y.: Stroke frequency, but not swimming speed, is related to body size in free-ranging seabirds, pinnipeds and cetaceans. Proceedings of the Royal Society London B, 274, 471-477, 2007.

Sato Y. and Nishida M.: Post-duplication charge evolution of phosphoglucose isomerases in teleost fishes through weak selection on many amino acids. BMC Evolutionary Biology, 7, 204, 2007.

Takahashi R., Watanabe K., Nishida M. and Hori M.: Evolution of feeding specialization in Tanganyikan scale-eating cichlids: a molecular phylogenetic approach. BMC Evolutionary Biology, 7, 195, 2007.

Takei Y.: Renin-Angiotensin system. In: Hormone Handbook (New eBook), edited by Urano A., Hyodo S. et al., Nankodo, Tokyo, pp.1166-1207, 2007. (in Japanese)

Takei Y.: Natriuretic peptide family. In: Hormone Handbook (New eBook), edited by Urano A., Hyodo S. et al., Nankodo, Tokyo, pp.1222-1267, 2007. (in Japanese)

Takei Y.: Homeostasis and hormone. In: Endocrine Phenomena and Life Activity, edited by Nagahama Y. and Iguchi T., Baifukan, Tokyo, pp.176-209, 2007. (in Japanese)

Takei Y. and Irimura T.: Maintenance of animal body. In: Life Science for Students in General Science, edited by Faculty of General Education, The university of Tokyo, Yodosha, Tokyo, pp.252-268, 2007. (in Japanese)

Takei Y., Ogoshi M. and Inoue K.: A 'reverse' phylogenetic approach for identification of novel osmoregulatory and cardiovascular hormones in vertebrates. Frontiers in Neuroendocrinology, 28, 143-160, 2007.

Takei Y. and Yuge S.: The intestinal guanylin system and seawater adaptation in eels. General and Comparative Endocrinology, 152, 339-351, 2007.

Tanoue H., Hamano A., Komatsu T. and Boisnier E.: The efficient coupling of GIS and acoustic survey in mapping fish abundance around a hill: The Hachirigase case study. In: GIS/spatial analyses in fisheries and aquatic sciences Volume 3, ed. by Nishida T., Kaiola P.J. and Caton A.E, Fishery-Aquatic GIS Research Group, Saitama, pp.115-128, 2007.

Trajanovska S., Inoue K., Takei Y. and Donald J.A.: Genomic analyses and cloning of novel chicken natriuretic peptide genes reveal new insights into natriuretic peptide evolution. Peptides, 28, 2155-2163, 2007.

Tsukada T., Nobata S., Hyodo S. and Takei Y.: Area postrema, a brain circumventricular organ, is the site of antidipsogenic action of circulating atrial natriuretic peptide in eels. Journal of Experimental Biology, 210, 3970-3978, 2007.

Tsukamoto K.: Study on the eel migration. Proceedings of prize thesis of the Association of Japanese Agricultural Scientific Societies, 10-12, 2007. (in Japanese)

Tsukamoto K.: Microscopia in the ocean - the way to discovery of the spawning area of the Japanese eel. Microscopia, 24, 14-22, 2007. (in Japanese)

Watanabe K., Jang-Liaw N.-H., Zhang C.-G., Jeon S.-R. and Nishida M.: Comparative phylogeography of bagrid catfishes in Taiwan. Ichthyological Research, 54, 253-261, 2007.

Watanabe S., Iida M., Fukui S., Takino S. and Tsukamoto K.: Seasonal changes in condition factor of an amphidromous goby Sicyopeterus japonicus in three rivers in Nanki area, middle Japan. Nankiseibutu, 49, 125-130, 2007. (in Japanese)

Watanabe T.: Molecular mechanisms of calcification in skeletogenesis of reef-building corals. Chishitsu News, 632, 35-40, 2007. (in Japanese)

Watanabe T. and Suzuki Y.: Intra-specific polymorphism in a reef coral using DNA markers, In: DNA swimming in the water, edited by Saruwatari T., Tokai University Press, Kanagawa, pp.31-51, 2007. (in Japanese)

Watanabe T., Utsunomiya Y. and Yuyama I.: Long-term laboratory culture of symbiotic coral juveniles and their use in ecotoxicological study. Journal of Experimental Marine Biology and Ecology, 352, 177-186, 2007.

Wewengkang, D.S., Watanabe T. and Hidaka M.: Studies on morphotypes of the coral Galaxea fascicularis from Okinawa: color pattern, nematocyst shape, and coenosteum density. Galaxea JCRS, 9, 49-59, 2007.

Yada T., Azuma T., Hyodo S., Hirano T., Grau E.G. and Schreck C.B.: Differential expression of corticoid receptor genes in rainbow trout (Oncorhynchus mykiss) immune system in response to acute stress. Canadian Journal of Fisheries and Aquatic Sciences, 64, 1382-1389, 2007.

Yamanoue Y., Miya M., Matsuura K., Yagishita N., Mabuchi K., Sakai H., Katoh M. and Nishida M.: Phylogenetic position of tetraodontiform fishes within the higher teleosts: Bayesian inferences based on 44 whole mitochondrial genome sequences. Molecular Phylogenetics and Evolution, 45, 89-101, 2007.

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Living Marine Resources

Akazaki T., Saruwatari T., Asanaga H., Sato S. and Watanabe Y.: Identification of imported Chirimen at the genus level by a direct sequencing method. In: Saruwatari T. ed., DNA swimming in the water. Ontogeny, phylogeny, ecology and application of aquatic organisms revealed from DNA, Tokai university Press, Hadano, pp.203-214, 2007. (in Japanese)

Fukazawa H., Kawamura T., Takami H. and Watanabe Y.: Oogenesis and relevant changes in egg quality of abalone Haliotis discus hannai during a single spawning season. Aquaculture, 270, 265-275, 2007.

Hara M.: Ultrastructure of spermatozoa of two species of Myctophidae: Symbolophorus californiensis and Notoscopelus sp. Japanese Journal of Ichthyology, 54, 41-46, 2007. (in Japanese)

Hayakawa J., Kawamura T., Horii T. and Watanabe Y.: Settlement of larval top shell, Turbo (Batillus) cornutus, in response to several marine algae. Fisheries Science, 73, 371-377, 2007.

Hirakawa N., Suzuki N., Narimatsu Y., Saruwatari T. and Ohno A.: The spawning and settlement season of Chlorophthalmus albatrossis along the Pacific coast of Japan. The Raffles Bulletin of Zoology Supplement, 14, 167-170, 2007.

Hoshino K. and Saruwatari T.: On the importance of preserving voucher specimens of DNA tissue samples. In: Saruwatari T. ed., DNA swimming in the water. Ontogeny, phylogeny, ecology and application of aquatic organisms revealed from DNA, Tokai University Press, Hadano, pp.215-226, 2007. (in Japanese)

Itoh S. and Kimura S.: Transport and survival of larvae of pelagic fishes in the Kuroshio system region estimated with Lagrangian drifters. Fisheries Science, 73, 1295-1308, 2007.

Kanaji Y. and Watanabe Y.: Early life ecology of jack mackerel in the Tsushima Warm Current area. Kaiyo Monthly, 39, 561-565, 2007. (in Japanese)

Kato Y., Takebe T., Masuma S., Kitagawa T. and Kimura S.: Turbulence effect on the survival rate and ingestion rate of bluefin tuna, Thunnus orientalis, larvae on the basis of a rearing experiment. Fisheries Science, 74, 48-53, 2007.

Katayama S., Saruwatari T., Kimura K., Yamaguchi M., Sasaki T., Torao M., Fujioka T. and Okada N.: Variation in migration patterns of pond smelt, Hypomesus nipponensis, in Japan determined by otolith microchemical analysis. Bulletin of the Japanese Society of Fisheries Oceanography, 71, 175-182, 2007.

Katsukawa T.: Studies on the adaptive management of fisheries resources. Nippon Suisan Gakkaishi, 73, 656-659, 2007. (in Japanese)

Katsukawa T.: Fisheries impact on Japanese sardine. Nippon Suisan Gakkaishi, 73, 763-766, 2007. (in Japanese)

Katsukawa T.: Management theory of fish stocks with species replacement by regime shift. In: Regime Shift, Kawasaki K, et al ed., Seizando Press, Tokyo, pp.175-182, 2007. (in Japanese)

Katsukawa T. and Yamakawa T.: Stock fluctuation and utilization of Japanese sardine Sardinops melanostictus. Nippon Suisan Gakkaishi, 73, 748-749, 2007. (in Japanese)

Kawamura T.: Selective settlement of abalone larvae and its ecological implications. Sessile Organisms, 24, 95-102, 2007. (in Japanese)

Kawamura T.: Stock management and enhancement of abalone species based on their ecological characteristics. Kaiyo Monthly, 39, 240-247, 2007. (in Japanese)

Kayama S., Tanabe T., Ogura M., Okuhara M., Tanaka S. and Watanabe Y.: Validation of daily ring formation in sagiltal otoliths of late juvenile skipjack tuna Katsuwonus pelamis. Fisheries Science, 73, 958-960, 2007.

Kim H., Kimura S., Shinoda A., Kitagawa T., Sasai Y. and Sasaki H.: Effect of El Nino on migration and larval transport of the Japanese eel (Anguilla japonica). ICES Journal of Marine Science, 64, 1387-1395, 2007.

Kim H., Kimura S. and Sugimoto T.: Transport of jack mackerel (Trachurus japonicus) eggs and larvae inferred from the numerical experiment in the East China Sea. Bulletin of the Japanese Society of Fisheries Oceanography, 71, 9-7, 2007.

Kimura S.: Larval migration of the Japanese eel -3000 nautical miles for seeking mother sea-. Frontier, 9, 9, 2007. (in Japanese)

Kimura S., Kitagawa T., Kato Y. and Yamaoka N.: Fluctuation in spawning environment of bluefin tuna and Japanese eel associated with global warming and their ecological response. Monthly Kaiyo, 39, 317-322, 2007. (in Japanese)

Kitagawa T.: The effect of water temperature on habitat use and vertical movements of young Pacific bluefin tuna Thunnus orientalis in the East China sea. In: Ecology and aquaculture of bluefin tuna, Sakamoto W. et al. ed., Kinki university Press, Osaka, pp.1-8, 2007.

Kitagawa T., Boustany A.M., Farwell C.J., Williams T.D., Castleton M.R. and Block B.A.: Horizontal and vertical movements of juvenile bluefin tuna (Thunnus orientalis) in relation to seasons and oceanographic conditions in the eastern Pacific Ocean. Fisheries Oceanography, 16, 409-421, 2007.

Kitagawa T., Kimura S., Nakata H. and Yamada H.: Why do young Pacific bluefin tuna repeatedly dive to depths through the thermocline. Fisheries Science, 73, 98-106, 2007.

Kitagawa T., Kimura S., Nakata H. and Yamada H.: Thermal adaptation of Pacific bluefin tuna Thunnus orientalis to temperate waters. Nippon Suisan Gakkaishi, 73, 647-647, 2007. (in Japanese)

Kitagawa T., Kato Y. and Kimura S.: Standard names for three Thunnus species, T. orientalis, T. thynnus, and T. atlanticus. Japanese Journal of Ichthyology, 54, 245-246, 2007. (in Japanese)

Kouketsu S., Yasuda I. and Hiroe Y.: Three-dimensional structure of frontal waves and associated salinity minimum formation along the Kuroshio Extension. Journal of Physical Oceanography, 37, 644-656, 2007.

Nishi G. and Saruwatari T. (ed.): Work at aquariums. An in-depth, behind the scene tour of aquarium exhibits, Tokai university Press, Hadano, vi+252pp., 2007. (in Japanese)

Okamoto M., Sato N., Asahida T. and Watanabe Y.: Pelagic juveniles of two morids (Teleostei: Gadiformes: Moridae), Antimora microlepis and Physiculus japonicus, from the western North Pacific. Species Diversity, 12, 17-27, 2007.

Onitsuka T., Kawamura T., Horii T., Hamaguchi M., 0hashi S., Takiguchi N. and Watanabe Y.: Identification of juvenile abalone Haliotis diversicolor based on the number of open and sealed respiratory pores. Fisheries Science, 73, 995-1000, 2007.

Onitsuka T., Kawamura T., Horii T., Takiguchi N., Takami H. and Watanabe Y.: Synchronized spawning of an abalone Haliotis diversicolor, triggered by typhoon events in Sagami Bay, Japan. Marine Ecology Progress Series, 351, 129-138, 2007.

Onitsuka T., Kawamura T., 0hashi S., Horii T. and Watanabe Y.: Dietary value of benthic diatoms and feeding transitions of post-larval abalone Haliotis diversicolor. Fisheries Science, 73, 295-302, 2007.

Oohara I., Murata Y., Kobayashi T., Takashima Y., Saruwatari T. and Hoshino K.: Comprehensive determination of the partial base sequences of mitochondrial DNA cytochrome b based on the "fish species name guideline". DNA polymorphism, 15, 189-194, 2007. (in Japanese)

Roberts R.D., Kawamura T. and Handley C.M.: Factors affecting settlement of abalone larvae (Haliotis iris)on benthic diatom films. Journal of Shellfish Research, 26, 323-334, 2007.

Saruwatari T.: Parental analysis of Teleosts using DNA. DNA polymorphism, 15, 360, 2007. (in Japanese)

Saruwatari T.: Exploring the secrets of their fragile body. Phylogeny of Salangid fishes revealed by DNA analysis. In: Saruwatari T. (ed.), DNA swimming in the water. Ontogeny, phylogeny, ecology and application of aquatic organisms revealed from DNA. Tokai University Press, Hadano, pp.133-156, 2007. (in Japanese)

Saruwatari T.: The story of the two sexes in the dark cold abyss. A case of Ceratioid Anglerfishes, whose males adhere to the female's body surface. In: Saruwatari T. (ed.), DNA swimming in the water. Ontogeny, phylogeny, ecology and application of aquatic organisms revealed from DNA, Tokai University Press, Hadano, pp.175-178, 2007. (in Japanese)

Shirafuji N., Watanabe Y., Takeda Y. and Kawamura T.: Maturation and spawning of Spratelloides gracilis (Clupeidae) in the temperate waters off Cape Shionomisaki, southern Japan. Fisheries Science, 73, 623-632, 2007.

Shirakihara K., Shirakihara M. and Yamamoto T.: Distribution and abundance of finless porpoise in the Inland Sea of Japan. Marine Biology, 150, 1025-1032, 2007.

Watanabe Y.: Latitudinal variation in recruitment dynamics of small pelagic fishes in the western North Pacific. Journal of Sea Research, 58, 46-58, 2007.

Watanabe Y.: Current status of fishery productions and coastal fisheries resources. Kaiyo Monthly, 39, 225-228, 2007. (in Japanese)

Watanabe Y.: Recruitment of Pacific saury and global warming. Kaiyo Monthly, 39, 309-313, 2007. (in Japanese)

Watanabe Y.: Early growth and recruitment of jack mackerel in the Tsushima Warm Current area. Kaiyo Monthly, 39, 506-509, 2007. (in Japanese)

Watanabe Y.: Two phases of the sardine population decline. Nippon Suisan Gakkaishi, 73, 754-757, 2007. (in Japanese)

Watanabe Y. and Takahashi M.: Regime shift and ecology of clupeoids. In: Regime Shift-Climate Changes and Fishery Resource Managements, edited by Kawasaki T., Taniguchi A., Hanawa K. and Nihira A., Seizando, Tokyo, pp.141-155, 2007. (in Japanese)

Won N-I., Kawamura T., 0nitsuka T., Hayakawa J., Watanabe S., Horii T., Takami H. and Watanabe Y.: Trophic structure of benthic community of abalone (Haliotis diversicolor) habitat in Sagami Bay, Japan. Fisheries Science, 73, 1123-1136, 2007.

Xie S. and Watanabe Y.: Hatch date and early growth and development of Trachurus japonicus immigrating into Sagami Bay, Japan. Marine & Freshwater Research, 58, 1-8, 2007.

Yasuda I.: Numerical studies on water-mass formation and transport. Annual report of Cooperative Research of Center for Climate System Research in 2006, 79-82, 2007. (in Japanese)

Yasuda I. and Watanabe T.: Chlorophyll a variation in the Kuroshio Extension revealed with a mixed layer tracking float: implication on long-term change of Pacific saury. Fisheries Oceanography, 16, 482-488, 2007.


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Multiple Field Marine Science

Aoki K., Amano M., Yoshioka M., Mori K., Tokuda D. and Miyazaki N.: Diel diving behavior of sperm whales off Japan. Marine Ecology Progress Series, 349, 277-287, 2007.

Fujiwara Y., Kawato M., Yamamoto T., Yamanaka T., Sato-Okoshi W., Noda C., Tsuchida S., Komai T., Cubelio S.S., Sasaki T., Jacobsen K., Kubokawa K., Fujikura K., Maruyama T., Furushima Y., 0kosiK., Miyake H., Miyazaki M., Nogi Y., Yatabe A. and Okutani T.: Three-year investigations into sperm whale-fall ecosystems in Japan. Marine Ecology, 28, 1-14, 2007.

Harino H., Ohji M., Wattayakorn G., Adulyanukosol K., Arai T. and Miyazaki N.: Accumulation of organotin compounds in tissues and organs of stranded whales in East Coast of Thailand. Archives of Environmental Contamination and Toxicology, 53, 119-125, 2007.

Harino H., Ohji M., Wattayakorn G., Adulyanukosol K., Arai T. and Miyazaki N.: Concentrations of organotin compounds in tissues and organs of Dugong from East Coast of Thailand. Archives of Environmental Contamination and Toxicology, 53, 495-502, 2007.

Harino H., Yamamoto Y., Eguchi S., Kawai S., Kurokawa Y., Arai T., 0hji M., 0kamura H. and Miyazaki N.: Occurrences of antifouling biocides in sediment and biological samples collected from Otsuchi Bay, Japan. Archives of Environmental Contamination and Toxicology, 52, 179-188, 2007.

Hirakawa S., Iwata H., Takeshita Y., Kim E.-Y., Sakamoto T., 0kajima Y., Amano M., Miyazaki N., Petrov E.A. and Tanabe S.: Molecular characterization of cytochrome P450 1A1, 1A2, and 1B1, and effects of polychlorinated dibenzo-p-dioxin, dibenzofuran, and biphenyl congeners on their hepatic expression in Baikal seal (Pusa sibirica). Toxicological Science, 97, 318-335, 2007.

Kohzu A., Miyajima T., Tateishi T., Watanabe T., Takahashi M. and Wada E.: Dynamics of 15N natural abundance in wood decomposing fungi and their ecophysiological implications. Isotopes in Environmental and Health Studies, 43, 83-94, 2007.

Komatsu T., Mikami A., Matsunaga D., Sagawa T., Tadokoro H., Boisnier E., Suzue M., Kusaka T., Ishida K. and Michida Y.: Influence of global warming on seaweed beds and drifting seaweeds. Kaiyo Monthly, 39, 336-341, 2007. (in Japanese)

Kudo T., Naito Y., Watanabe Y. and Miyazaki N.: First use of fish borne camera for homing chum salmon revealed fish eye's view in Otsuchi Bay area, Iwate, Japan. Aquatic Biology, 1, 85-90, 2007.

Miyazaki N.: Marine pollution by harmful chemicals and its biological influences-II Organic chlorine compounds (the first part). Japan Fisheries Resource Conservation Association, Tokyo, 491, pp.3-7, 2007. (in Japanese)

Miyazaki N.: Marine pollution by harmful chemicals and its biological influences-II Organic chlorine compounds (the second part). Japan Fisheries Resource Conservation Association, Tokyo, 503, pp.3-7, 2007. (in Japanese)

Miyazaki N.: Message from marine mammals. In: The Sea of Japan in connection: To construct a new cultural area surrounding The Sea of Japan. Muto M. and Kitagawa F. (ed.), Gendaikikakushitsu, Tokyo, pp.161-173, 2007. (in Japanese)

Miyazaki N.: Collaborative research on between Japan and China, Chinese sturgeon at Yangtze River. Ecology Cafe (Jan. 9, 2007), pp.1-4, 2007. (in Japanese)

Nagata T. and Miyajima T.: Stable Isotopes in Environmental Assessment of Watersheds-Progress towards an Integrated Approach, Kyoto University Press, 476pp., 2007. (in Japanese)

Nagata T. and Motegi C.: Sea of Microbes-Role of microbial community in marine ecosystems. In: Biological Diversity in Nature, edited by The Kyoto University Museum and Center for Ecological Research, Kyoto University, pp.273-295, 2007.

Obata H.: Analytical chemistry of platinum in the aquatic environments. In: Bookers(ed.), Integrated techniques for the recycle of novel and rare metals. NTN, pp.123-130, 2007. (in Japanese)

Ohji M., Arai T. and Miyazaki N.: Comparison of organotin accumulation in the masu salmon Oncorhynchus masou accompanying migratory histories, Estuarine, Coastal and Shelf Science, 72, 721-731, 2007.

Ohji M., Arai T., Midorikawa S., Harino H., Masuda R., Miyazaki N.: Distribution and fate of organotin compounds in the Japanese coastal water. Water, Air & Soil Pollution, 178, 255-265, 2007.

Oka M., Arai T. and Miyazaki N.: Differences in organochlorine accumulation in masu salmon Oncorhynchus masou masou between fluvial and sea-run forms. Water, Air & Soil Pollution, 178, 309-313, 2007.

Watanuki Y., Takahashi A., Daunt F., Sato K., Miyazaki N. and Wanless S.: Underwater images from bird-borne cameras provide clue to poor breeding success of European Shags in 2005. British Bird, 100, 466-470, 2007.

Yang J., Harino H. and Miyazaki N.: Transplacental transfer of phenyltins to fetus of Dall's porpoises (Phocoenoides dalli) to her fetus. Chemosphere, 67, 244-249, 2007.

Yang J., Kunito T., Tanabe S. and Miyazaki N.: Mercury and its relation with selenium in the liver of Dall's porpoises (Phocoenoides dalli) off the Sanriku coast of Japan. Environmental Pollution, 148, 669-673, 2007.

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